Internships

01.09. - 28.10.2025 
Muneeb Sayed, M.Sc. Computational Biology
"Do immune cell fractions predict survival after trimodality therapy in esophageal/GEJ adenocarcinoma?" (full-time)

14.07. - 01.08.2025 
Benjamin Eckhardt, M.Sc. Informatics
"Tissue deconvolution - evaluating DynaMiCs on corresponding bulk and single-cell transcriptomes" (full-time)

02.06. - 20.06.2025 
Muneeb Sayed, M.Sc. Computational Biology
"T-cell repertoire analysis in response to yellow fever vaccination" (full-time)

02.06. - 29.08.2025 
Andrés Gallego Eziquio, M.Sc. (Erasmus student, Tecnológico de Monterrey) 
"Computational analysis of prognostic immune signatures in pouchitis" (full-time)

05.05. - 27.06.2025 
Jakob Antonin Demmer, M.Sc. Computational Biology 
"Computational annotation and analysis of single-cell RNA-seq in COVID-19" (2d/week)

25.03. - 29.08.2025 
Prashanth Sridhar, M.Sc. Computational Biology 
"Peptide-protein docking for predicting TCR-antigen interaction" (full-time)

25.03. - 20.05.2025 
Janosch Wilhelm Scherler, M.Sc. Computational Biology
"Computational analysis of immune aging trajectories" (full-time)

17.02. - 14.04.2025 
Jakob Antonin Demmer, M.Sc. Computational Biology
"Application of T Cell Receptor Repertoire Analysis to COVID-19" (full-time)

07.08. - 25.08.2023 
Ozan Kanbertay, M.Sc. Computational Biology
"Predicting TCR structure with AlphaFold" (full-time)

30.05. - 12.08.2024 
Anna-Rosa Krüger, B.Sc. Data Science
"Evaluation of tools for T-cell receptor analysis" (2d/week)

11.07. - 29.07.2022 
Friederike Jahnke, M.Sc. Developmental, Neural and Behavioral Biology
"Alignment-free clustering of T-cell receptor clones in classical Hodgkin's Lymphoma using MMSeqs2" (full-time)

28.06. - 06.08.2021 Ryck Leberecht, B.Sc. Biology, 
"Processing and interpretation of lymphoma-based data" (full-time)

B.Sc. / M.Sc. Theses

19.01. - now
Jakob Antonin Demmer, M.Sc. Computational Biology
"Extending immune cell-type deconvolution for predicting immune aging patterns across species" (working title)

14.10. - now 
Janosch Wilhelm Scherler, M.Sc. Computational Biology
"Extending immune cell-type deconvolution for predicting Long COVID" (working title)

01.04. - 30.09.2025 
Laurenz Engel, M.Sc. Data Science
"Improving estimation of cellular composition in bulk RNA-seq data using ensemble-based machine learning"

09.08. - 09.11.2021 
Ryck Leberecht, B.Sc. Biology
"Computational multi-omics analysis of Mature B-cell Lymphomas"

Student Assistant

07.03. - 31.08.2022 
Laurenz Engel, B.Sc. Data Science
"Computational multi-omics analysis of classical Hodgkin's Lymphoma" 

Courses

upcoming
 

upcoming
Fundamentals of biostatistics in R

13.11.2025
Single-cell and spatial transcriptomics for molecular biology students

19.05. - 23.05.2025
R course for biology PhD students of the exTra consortia

31.03. - 04.04.2025
Fundamentals of biostatistics in R

11.11.2024
Single-cell and spatial transcriptomics for molecular biology students

09.11. - 12.11.2021
Genomics Data Analysis - Course for Molecular Biology

26.07. - 29.07.2021
Supervised Learning & Enrichment

Open Positions

Students interested in theses or internships are warmly invited to get in touch with me

Home

About me

CV

Career, skills, and scientific background

Publications

Peer-reviewed research articles and preprints

Conferences

Presentations at scientific meetings

Contact

Mail: nicole.seifert@bioinf.med.uni-goettingen.de

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